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  5. Als_g15619

Als_g15619 (VAN3, SFC, AGD3)


Aliases : VAN3, SFC, AGD3

Description : class I ARF-GAP ARF-GTPase-activating protein & original description: none


Gene families : OG0002309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15619

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00121120 AGD2,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
AT1G10870 AGD4 ARF-GAP domain 4 0.04 OrthoFinder output from all 47 species
Adi_g058541 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Aev_g02576 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Ala_g02481 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.04 OrthoFinder output from all 47 species
Ala_g19622 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11040 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.06 OrthoFinder output from all 47 species
Ehy_g23167 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010214001 AGD4 Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42134.2 AGD2, LOC_Os02g42134 class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Len_g14712 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11485 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.05 OrthoFinder output from all 47 species
MA_12739g0010 AGD2 ADP-ribosylation factor GTPase-activating protein AGD3... 0.01 OrthoFinder output from all 47 species
Mp1g10820.1 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Msp_g28107 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.03 OrthoFinder output from all 47 species
Pir_g01993 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.02 OrthoFinder output from all 47 species
Solyc04g008660.4.1 AGD2, Solyc04g008660 class I ARF-GAP ARF-GTPase-activating protein 0.05 OrthoFinder output from all 47 species
Spa_g56823 VAN3, SFC, AGD3 class I ARF-GAP ARF-GTPase-activating protein & original... 0.05 OrthoFinder output from all 47 species
Zm00001e023047_P001 AGD2, Zm00001e023047 ADP-ribosylation factor GTPase-activating protein AGD2... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001849 PH_domain 294 428
IPR001164 ArfGAP_dom 509 650
IPR002110 Ankyrin_rpt 770 842
No external refs found!