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  5. Als_g15380

Als_g15380


Description : component *(Sec24) of Sec23/24 cargo adaptor subcomplex & original description: none


Gene families : OG0003525 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15380
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00084390 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
AT3G44340 CEF clone eighty-four 0.02 OrthoFinder output from all 47 species
AT4G32640 No alias Sec23/Sec24 protein transport family protein 0.03 OrthoFinder output from all 47 species
Adi_g059790 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Adi_g099755 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.02 OrthoFinder output from all 47 species
Aev_g01583 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ala_g05132 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aob_g10600 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Aop_g04939 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Aspi01Gene00682.t1 CEF, Aspi01Gene00682 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.03 OrthoFinder output from all 47 species
Ceric.16G039000.1 Ceric.16G039000 component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000829.3 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Cre01.g035850 CEF Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g06456 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.06 OrthoFinder output from all 47 species
Dcu_g06486 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.08 OrthoFinder output from all 47 species
Dde_g23704 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Ehy_g09715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014611001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.07 OrthoFinder output from all 47 species
Gb_38621 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.06 OrthoFinder output from all 47 species
LOC_Os11g29200.1 CEF, LOC_Os11g29200 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.02 OrthoFinder output from all 47 species
LOC_Os12g24250.1 CEF, LOC_Os12g24250 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.1 OrthoFinder output from all 47 species
Len_g03398 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Lfl_g26302 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.07 OrthoFinder output from all 47 species
MA_45050g0010 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
MA_923164g0010 CEF component Sec24 of Sec23/24 cargo adaptor subcomplex 0.04 OrthoFinder output from all 47 species
Mp7g13350.1 No alias component Sec24 of Sec23/24 cargo adaptor subcomplex 0.05 OrthoFinder output from all 47 species
Nbi_g12383 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.11 OrthoFinder output from all 47 species
Pir_g11399 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Ppi_g06491 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Smo140536 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Solyc06g084210.3.1 CEF, Solyc06g084210 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.03 OrthoFinder output from all 47 species
Spa_g52344 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Tin_g10861 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex... 0.04 OrthoFinder output from all 47 species
Zm00001e021459_P002 CEF, Zm00001e021459 component Sec24 of Sec23/24 cargo adaptor subcomplex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030127 COPII vesicle coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 946 1013
IPR012990 Sec23_24_beta_S 729 812
IPR006900 Sec23/24_helical_dom 824 920
IPR006895 Znf_Sec23_Sec24 410 448
IPR006896 Sec23/24_trunk_dom 485 723
No external refs found!