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  5. Als_g15351

Als_g15351


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15351

Target Alias Description ECC score Gene Family Method Actions
AT5G42700 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Ala_g04057 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g23618 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene04981.t1 Aspi01Gene04981 REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene24779.t1 Aspi01Gene24779 REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene24780.t1 Aspi01Gene24780 REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene54333.t1 Aspi01Gene54333 REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g12551 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.07G043800.1 Ceric.07G043800 REM-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.14G017400.1 Ceric.14G017400 REM-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.35G050300.1 Ceric.35G050300 REM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15058 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18248 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g41437 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007552001 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.02 OrthoFinder output from all 47 species
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
Gb_35990 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Len_g01795 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55690 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.04 OrthoFinder output from all 47 species
MA_430451g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Msp_g09553 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08674 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39771 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g28568 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004736 No alias REM-type transcription factor & original description: CDS=35-988 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018379 No alias REM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g14184 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g108140.4.1 Solyc01g108140 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.06 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Spa_g00422 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g32723 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000624_P003 Zm00001e000624 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Zm00001e020584_P001 Zm00001e020584 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Zm00001e021364_P001 Zm00001e021364 B3 domain-containing protein Os11g0197600 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 130 219
No external refs found!