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Aliases : VCS
Description : not classified & original description: none
Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00131900 | VCS,... | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G13290 | VCR | varicose-related | 0.02 | OrthoFinder output from all 47 species | |
| AT3G13300 | VCS | Transducin/WD40 repeat-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055830 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107355 | VCR | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07559 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08777 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19508.t1 | VCS, Aspi01Gene19508 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19510.t1 | VCS, Aspi01Gene19510 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04739 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14873 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27245 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g74923 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G068900.1 | VCS, Ceric.06G068900 | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g14564 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11716 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006976001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014783001 | VCS | RNA processing.RNA decay.deadenylation-dependent... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g19660.1 | VCS, LOC_Os06g19660 | scaffold component VCS of mRNA decapping complex | 0.02 | OrthoFinder output from all 47 species | |
| MA_10431534g0030 | VCS | scaffold component VCS of mRNA decapping complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g26178 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01496 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09332 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13830 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03283 | VCS | scaffold component *(VCS) of mRNA decaPping complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16429 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g005920.4.1 | VCS, Solyc10g005920 | scaffold component VCS of mRNA decapping complex | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07074 | VCR | scaffold component *(VCS) of mRNA decapping complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g23840 | VCS | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g31000 | VCR | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g08563 | VCS | scaffold component *(VCS) of mRNA decapping complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023399_P003 | VCS, Zm00001e023399 | scaffold component VCS of mRNA decapping complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032401 | EDC4_WD40 | 56 | 332 |
| No external refs found! |