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  5. Als_g15245

Als_g15245


Description : not classified & original description: none


Gene families : OG0004907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15245
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00247820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G52110 No alias unknown protein; Has 191 Blast hits to 174 proteins in... 0.07 OrthoFinder output from all 47 species
Aop_g11251 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g11783 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g32015 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Aspi01Gene70208.t1 Aspi01Gene70208 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Azfi_s0121.g046875 No alias not classified & original description: CDS=185-2353 0.05 OrthoFinder output from all 47 species
Ceric.05G069800.1 Ceric.05G069800 not classified & original description: pacid=50578407... 0.01 OrthoFinder output from all 47 species
Dcu_g20479 No alias not classified & original description: none 0.22 OrthoFinder output from all 47 species
Dcu_g37658 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01032083001 No alias No description available 0.1 OrthoFinder output from all 47 species
LOC_Os03g07810.1 LOC_Os03g07810 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Len_g56004 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Lfl_g19396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29221 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15515 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004716 No alias not classified & original description: CDS=158-535 0.02 OrthoFinder output from all 47 species
Solyc01g087080.4.1 Solyc01g087080 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g24117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000549_P002 Zm00001e000549 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038892_P003 Zm00001e038892 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!