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  5. Als_g15224

Als_g15224 (ATPA)


Aliases : ATPA

Description : subunit alpha of peripheral CF1 subcomplex of ATP synthase complex & original description: none


Gene families : OG0001376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001376_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15224
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00076150 ATPA ATP synthase subunit alpha, chloroplastic OS=Amborella trichopoda 0.04 OrthoFinder output from all 47 species
AMTR_s00390p00012050 ATPA Photosynthesis.photophosphorylation.ATP synthase... 0.04 OrthoFinder output from all 47 species
ATCG00120 ATPA ATP synthase subunit alpha 0.1 OrthoFinder output from all 47 species
ATMG01190 ATP1 ATP synthase subunit 1 0.02 OrthoFinder output from all 47 species
Aev_g01324 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.15 OrthoFinder output from all 47 species
Aev_g20803 ATP1 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.11 OrthoFinder output from all 47 species
Ala_g00134 ATP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15530 ATP1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02611 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Cba_g17152 ATP1 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.07 OrthoFinder output from all 47 species
Ceric.01G056900.1 ATPA, Ceric.01G056900 not classified & original description: pacid=50591476... 0.09 OrthoFinder output from all 47 species
Ceric.03G088300.1 ATP1, Ceric.03G088300 not classified & original description: pacid=50573201... 0.04 OrthoFinder output from all 47 species
Ceric.09G009000.1 ATPA, Ceric.09G009000 not classified & original description: pacid=50586770... 0.04 OrthoFinder output from all 47 species
Ceric.09G009300.1 ATPA, Ceric.09G009300 not classified & original description: pacid=50588520... 0.03 OrthoFinder output from all 47 species
Ceric.17G026500.1 ATP1, Ceric.17G026500 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.05 OrthoFinder output from all 47 species
Ceric.19G010500.1 ATPA, Ceric.19G010500 not classified & original description: pacid=50575425... 0.06 OrthoFinder output from all 47 species
Ceric.1Z117200.1 ATPA, Ceric.1Z117200 not classified & original description: pacid=50577000... 0.11 OrthoFinder output from all 47 species
Ceric.1Z126000.1 ATP1, Ceric.1Z126000 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.06 OrthoFinder output from all 47 species
Ceric.1Z215100.1 ATP1, Ceric.1Z215100 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.04 OrthoFinder output from all 47 species
Ceric.1Z240900.1 ATP1, Ceric.1Z240900 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.05 OrthoFinder output from all 47 species
Ceric.1Z297100.1 ATP1, Ceric.1Z297100 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.04 OrthoFinder output from all 47 species
Ceric.1Z303100.1 ATP1, Ceric.1Z303100 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.05 OrthoFinder output from all 47 species
Ceric.29G005400.1 ATPA, Ceric.29G005400 not classified & original description: pacid=50625214... 0.07 OrthoFinder output from all 47 species
Ceric.38G027200.1 ATP1, Ceric.38G027200 not classified & original description: pacid=50579504... 0.08 OrthoFinder output from all 47 species
Ceric.38G027500.1 ATP1, Ceric.38G027500 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.1 OrthoFinder output from all 47 species
Dcu_g21289 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
GSVIVT01002448001 ATP1 ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus 0.02 OrthoFinder output from all 47 species
Gb_03832 ATP1 ATP synthase subunit alpha, mitochondrial OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Gb_18609 ATPA ATP synthase subunit alpha, chloroplastic OS=Cycas... 0.03 OrthoFinder output from all 47 species
Gb_23670 No alias ATP synthase subunit alpha, mitochondrial OS=Marchantia... 0.06 OrthoFinder output from all 47 species
LOC_Os04g16740.1 ATPA, LOC_Os04g16740 subunit alpha of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
LOC_Os10g21240.1 ATPA, LOC_Os10g21240 subunit alpha of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Lfl_g02090 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Lfl_g37428 ATP1 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.03 OrthoFinder output from all 47 species
Mp4g16390.1 ATP1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp5g21420.1 ATPA ATP synthase subunit alpha, chloroplastic OS=Marchantia... 0.05 OrthoFinder output from all 47 species
Nbi_g04347 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.05 OrthoFinder output from all 47 species
Nbi_g14741 ATP1 subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.06 OrthoFinder output from all 47 species
Ore_g20650 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Pir_g15028 ATP1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g18655 ATPA subunit alpha of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Pir_g64497 ATP1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003503 ATPA not classified & original description: CDS=1-624 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028298 ATPA not classified & original description: CDS=1-471 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028299 ATPA not classified & original description: CDS=1-399 0.05 OrthoFinder output from all 47 species
Sam_g00615 No alias subunit alpha of peripheral CF1 subcomplex of ATP... 0.07 OrthoFinder output from all 47 species
Sam_g45092 No alias subunit alpha of ATP synthase peripheral MF1 subcomplex... 0.03 OrthoFinder output from all 47 species
Smo137834 ATPA Photosynthesis.photophosphorylation.ATP synthase... 0.1 OrthoFinder output from all 47 species
Solyc00g500050.1.1 ATPA, Solyc00g500050 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc00g500133.1.1 ATPA, Solyc00g500133 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc00g500203.1.1 ATPA, Solyc00g500203 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc00g500292.1.1 ATPA, Solyc00g500292 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc00g500323.1.1 ATPA, Solyc00g500323 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc00g500332.1.1 ATPA, Solyc00g500332 subunit alpha of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Solyc04g071300.3.1 ATPA, Solyc04g071300 ATP synthase subunit alpha, chloroplastic OS=Cucumis... 0.02 OrthoFinder output from all 47 species
Zm00001e003905_P001 ATPA, Zm00001e003905 subunit alpha of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 29 94
IPR000793 ATP_synth_asu_C 373 497
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 151 366
No external refs found!