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  5. Als_g15202

Als_g15202 (NEDD1)


Aliases : NEDD1

Description : regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin ring complex & original description: none


Gene families : OG0003254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g15202

Target Alias Description ECC score Gene Family Method Actions
Aev_g20113 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.02 OrthoFinder output from all 47 species
Azfi_s0367.g066999 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.03 OrthoFinder output from all 47 species
Dac_g00978 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g12137 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01016463001 NEDD1 Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
LOC_Os09g09470.1 NEDD1, LOC_Os09g09470 regulatory component GCP-WD/NEDD1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Tin_g06654 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.03 OrthoFinder output from all 47 species
Zm00001e009423_P002 NEDD1, Zm00001e009423 regulatory component GCP-WD/NEDD1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!