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  5. Pnu_g11792

Pnu_g11792


Description : auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex & original description: none


Gene families : OG0000821 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11792
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT3G43230 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
Als_g07342 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Cba_g03200 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species
Ceric.20G075200.1 Ceric.20G075200 not classified & original description: pacid=50567423... 0.03 OrthoFinder output from all 47 species
Ehy_g18591 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.02 OrthoFinder output from all 47 species
Ore_g05156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31118 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007461 Ysc84_actin-binding 439 564
IPR000306 Znf_FYVE 257 322
IPR001841 Znf_RING 27 71
No external refs found!