Als_g14624

Description : nucleoporin of nuclear pore complex *(NUP98) & original description: none

Gene families : OG0001205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001205_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g14624

Target	Alias	Description	ECC score	Gene Family Method
AT1G80680	NUP96, PRE, SAR3, MOS3	SUPPRESSOR OF AUXIN RESISTANCE 3	0.03	OrthoFinder output from all 47 species
Adi_g014270	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g086878	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
Ala_g12918	NUP96, PRE, SAR3, MOS3	scaffold nucleoporin of nuclear pore complex & original...	0.02	OrthoFinder output from all 47 species
Dcu_g22620	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01019716001	No alias	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Ore_g04236	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.02	OrthoFinder output from all 47 species
Ore_g15205	NUP96, PRE, SAR3, MOS3	scaffold nucleoporin of nuclear pore complex & original...	0.03	OrthoFinder output from all 47 species
Ore_g18734	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g22018	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.04	OrthoFinder output from all 47 species
Spa_g06165	No alias	nucleoporin of nuclear pore complex *(NUP98) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005643	nuclear pore	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017056	structural constituent of nuclear pore	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007230	Nup98_auto-Pept-S59_dom	815	961

External Links

No external refs found!