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  5. Als_g14220

Als_g14220 (MYB3R-3, AtMYB3R3)


Aliases : MYB3R-3, AtMYB3R3

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14220

Target Alias Description ECC score Gene Family Method Actions
AT3G09230 MYB1, AtMYB1 myb domain protein 1 0.01 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.03 OrthoFinder output from all 47 species
Aop_g08938 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0130.g049054 MYB54, ATMYB54 not classified & original description: CDS=1-720 0.03 OrthoFinder output from all 47 species
Ceric.06G081400.1 ATMYB3R5,... R1R2R3-MYB transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g42862 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10115 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01034171001 MYB3R-3, AtMYB3R3 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
LOC_Os01g62410.1 ATMYB3R5,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g17190.1 AtMYB3R4,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_10426233g0010 MYB3R-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp1g08640.1 MYB3R-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Nbi_g44161 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002693 MYB56, AtMYB56 not classified & original description: CDS=2737-4053 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc09g010820.3.1 ATMYB3R5,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e021349_P001 BW52, ATMYB52,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
Zm00001e031356_P001 MYB3R-1,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 50 96
IPR001005 SANT/Myb 154 197
IPR001005 SANT/Myb 102 148
No external refs found!