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  5. Als_g14164

Als_g14164 (PSBG)


Aliases : PSBG

Description : component *(NdhK) of NDH subcomplex A & original description: none


Gene families : OG0002329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002329_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g14164
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
ATCG00430 PSBG photosystem II reaction center protein G 0.12 OrthoFinder output from all 47 species
Aev_g09763 PSBG component *(NdhK) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Ceric.02G013800.1 PSBG, Ceric.02G013800 component *(NdhK) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ceric.10G060900.1 PSBG, Ceric.10G060900 component *(NdhK) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Ceric.1Z109800.1 PSBG, Ceric.1Z109800 component *(NdhK) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z161800.1 PSBG, Ceric.1Z161800 component *(NdhK) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ceric.29G033100.1 PSBG, Ceric.29G033100 component *(NdhK) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Gb_14100 PSBG NAD(P)H-quinone oxidoreductase subunit K, chloroplastic... 0.06 OrthoFinder output from all 47 species
Gb_18611 PSBG component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
Gb_28626 PSBG component NdhK of NDH subcomplex A 0.06 OrthoFinder output from all 47 species
LOC_Os01g58022.1 PSBG, LOC_Os01g58022 component NdhK of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Lfl_g05990 PSBG component *(NdhK) of NDH subcomplex A & original... 0.13 OrthoFinder output from all 47 species
Smo4549 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
Smo4550 PSBG Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.1 OrthoFinder output from all 47 species
Solyc00g500062.1.1 PSBG, Solyc00g500062 component NdhK of NDH subcomplex A 0.1 OrthoFinder output from all 47 species
Zm00001e042032_P001 PSBG, Zm00001e042032 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042053_P001 PSBG, Zm00001e042053 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042079_P001 PSBG, Zm00001e042079 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042097_P001 PSBG, Zm00001e042097 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042149_P001 PSBG, Zm00001e042149 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Zm00001e042352_P001 PSBG, Zm00001e042352 component NdhK of NDH subcomplex A 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR006137 NADH_UbQ_OxRdtase-like_20kDa 76 183
No external refs found!