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  5. Als_g13888

Als_g13888 (ATXR6, SDG34)


Aliases : ATXR6, SDG34

Description : class-IV histone methyltransferase *(ATXR5/6) & original description: none


Gene families : OG0002675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002675_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13888
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aop_g09442 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene49650.t1 ATXR6, SDG34,... class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G040900.1 SDG15, ATXR5,... class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g51566 SDG15, ATXR5 class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01038589001 ATXR6, SDG34 Chromatin organisation.histone modifications.histone... 0.09 OrthoFinder output from all 47 species
Gb_02491 ATXR6, SDG34 class IV histone methyltransferase component of histone... 0.06 OrthoFinder output from all 47 species
LOC_Os02g03030.1 ATXR6, SDG34,... class IV histone methyltransferase component of histone... 0.03 OrthoFinder output from all 47 species
MA_73622g0010 ATXR6, SDG34 class IV histone methyltransferase component of histone... 0.11 OrthoFinder output from all 47 species
Mp5g03760.1 SDG15, ATXR5 class IV histone methyltransferase component of histone... 0.07 OrthoFinder output from all 47 species
Msp_g04863 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10637 ATXR6, SDG34 class-IV histone methyltransferase *(ATXR5/6) & original... 0.03 OrthoFinder output from all 47 species
Solyc03g082860.3.1 ATXR6, SDG34,... class IV histone methyltransferase component of histone... 0.08 OrthoFinder output from all 47 species
Spa_g43410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!