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  5. Pnu_g11690

Pnu_g11690 (LOF2, MYB105, ATMYB105)


Aliases : LOF2, MYB105, ATMYB105

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11690

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 OrthoFinder output from all 47 species
AT3G09370 MYB3R-3, AtMYB3R3 myb domain protein 3r-3 0.03 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 OrthoFinder output from all 47 species
AT4G18770 AtMYB98, MYB98 myb domain protein 98 0.05 OrthoFinder output from all 47 species
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 OrthoFinder output from all 47 species
Aev_g38609 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ala_g03504 BW52, ATMYB52, MYB52 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09398 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Azfi_s0179.g056258 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001042.7 MYB1, AtMYB1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Cre07.g345350 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Ehy_g06557 MYB54, ATMYB54 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01020038001 MYB88, AtMYB88 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os01g16810.1 LOF2, MYB105,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g28320.1 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g38460.1 ATMYB3R5,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os09g01960.1 MYBR1, MYB44,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
LOC_Os11g10130.1 BW52, ATMYB52,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Len_g02343 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Mp1g17210.1 ATMYB119, MYB119 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Nbi_g24734 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g22011 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ore_g32846 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g13372 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.05 OrthoFinder output from all 47 species
Pnu_g08134 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02255 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14529 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019382 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g31253 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g05555 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Tin_g24569 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g43768 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Zm00001e021349_P001 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 140 186
IPR001005 SANT/Myb 192 235
No external refs found!