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  5. Als_g13803

Als_g13803 (RPS18A, PFL, PFL1)


Aliases : RPS18A, PFL, PFL1

Description : component *(uS13) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13803

Target Alias Description ECC score Gene Family Method Actions
Adi_g079654 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre06.g272950 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dcu_g07903 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58050.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Lfl_g16499 RPS18A, PFL, PFL1 component *(uS13) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
MA_10431843g0010 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp1g07420.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp5g02820.1 RPS18A, PFL, PFL1 component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species
Sam_g32254 No alias component *(uS13) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Smo267619 RPS18A, PFL, PFL1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Solyc03g078290.3.1 RPS18A, PFL,... component RPS18 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e005967_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e011880_P001 RPS18A, PFL,... component RPS18 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!