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  5. Als_g13789

Als_g13789


Description : component *(TFB1) of TFIIh basal transcription factor complex & original description: none


Gene families : OG0004762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13789

Target Alias Description ECC score Gene Family Method Actions
Sam_g04936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021743_P002 Zm00001e021743 subunit TFB1 of multifunctional TFIIh complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR005607 BSD_dom 212 255
IPR013876 TFIIH_BTF_p62_N 21 98
No external refs found!