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  5. Als_g13490

Als_g13490


Description : protein involved in PS-II assembly *(RBD1) & original description: none


Gene families : OG0005565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13490

Target Alias Description ECC score Gene Family Method Actions
AT1G54500 No alias Rubredoxin-like superfamily protein 0.07 OrthoFinder output from all 47 species
Adi_g001061 No alias protein involved in PS-II assembly *(RBD1) & original... 0.06 OrthoFinder output from all 47 species
Ala_g25461 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05676 No alias protein involved in PS-II assembly *(RBD1) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene26833.t1 Aspi01Gene26833 protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.23 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Cre07.g315150 No alias Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Gb_24370 No alias RBD1 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
LOC_Os08g23410.1 LOC_Os08g23410 RBD1 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species
Mp5g13990.1 No alias RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Msp_g09118 No alias protein involved in PS-II assembly *(RBD1) & original... 0.08 OrthoFinder output from all 47 species
Ore_g09698 No alias protein involved in PS-II assembly *(RBD1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1254.g027977 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07714 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Solyc01g097910.2.1 Solyc01g097910 RBD1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Spa_g09611 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g22961 No alias protein involved in PS-II assembly *(RBD1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006086_P001 Zm00001e006086 RBD1 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR024935 Rubredoxin_dom 104 150
No external refs found!