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  5. Als_g13166

Als_g13166


Description : histone H3 variant *(CENH3) & original description: none


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13166
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00237320 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00027p00248560 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from all 47 species
Aspi01Gene36120.t1 Aspi01Gene36120 histone *(H3) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14466 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14467 No alias histone *(H3) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02017 No alias histone H3 variant *(CENH3) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16288 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g23375 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g21010 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33705 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 25 149
No external refs found!