1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g13096

Als_g13096 (BUM1, SHL, STM, WAM, WAM1, BUM)


Aliases : BUM1, SHL, STM, WAM, WAM1, BUM

Description : BEL-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g13096

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00244220 BP, BP1, KNAT1,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00165180 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT1G62360 BUM1, SHL, STM,... KNOX/ELK homeobox transcription factor 0.03 OrthoFinder output from all 47 species
Als_g31921 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15698 KNAT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29252 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12162 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24670 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009273001 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
GSVIVT01031241001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Len_g22685 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17777 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10115 KNAT4 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025100_P003 KNAT3, Zm00001e025100 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR005539 ELK_dom 38 58
IPR008422 Homeobox_KN_domain 77 116
No external refs found!