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  5. Als_g12986

Als_g12986


Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12986

Target Alias Description ECC score Gene Family Method Actions
AT2G41840 No alias Ribosomal protein S5 family protein 0.04 OrthoFinder output from all 47 species
Aop_g09364 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ceric.30G013900.1 Ceric.30G013900 component *(uS5) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ceric.31G046200.1 Ceric.31G046200 component *(uS5) of small ribosomal-subunit (SSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.135 XW6 Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Cre01.g039250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
Dac_g00614 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59310.1 LOC_Os03g59310 component RPS2 of SSU proteome 0.04 OrthoFinder output from all 47 species
Lfl_g25707 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_37929g0010 No alias 40S ribosomal protein S2-2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g07675 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g25636 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Solyc04g063290.3.1 Solyc04g063290 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc04g074300.3.1 Solyc04g074300 component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g13171 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g17385 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Spa_g40249 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g47984 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g50366 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g57025 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 86 150
IPR005324 Ribosomal_S5_C 170 242
No external refs found!