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  5. Als_g12768

Als_g12768 (SKP2A)


Aliases : SKP2A

Description : substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0004331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004331_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12768

Target Alias Description ECC score Gene Family Method Actions
AT1G21410 SKP2A F-box/RNI-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ceric.12G084300.1 SKP2A, Ceric.12G084300 substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Ore_g04301 SKP2A substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g03355 SKP2B, ATSKP2;2 substrate adaptor *(SKP2) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 5 38
No external refs found!