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  5. Als_g12670

Als_g12670 (ECT5)


Aliases : ECT5

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12670

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00073360 ECT2,... No description available 0.03 OrthoFinder output from all 47 species
AT3G13460 ECT2 evolutionarily conserved C-terminal region 2 0.03 OrthoFinder output from all 47 species
Adi_g018882 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041963 ECT6 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057161 ECT5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076980 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108043 ECT5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12419 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06040 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20530 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38037 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g52458 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G077700.1 ECT7, Ceric.19G077700 methylation reader *(ECT) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g09175 ECT8 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02898 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07823 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_16810 ECT8 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Gb_17619 ECT2 methylation reader (ECT) 0.01 OrthoFinder output from all 47 species
Gb_34757 ECT8 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06240.1 ECT4, LOC_Os03g06240 methylation reader (ECT) 0.04 OrthoFinder output from all 47 species
Len_g14695 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02026 ECT8 methylation reader *(ECT) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g22621 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03142 ECT7 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09604 ECT3 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16704 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17729 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g028860.3.1 ECT2, Solyc01g028860 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Solyc01g103540.3.1 ECT11, Solyc01g103540 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Spa_g05381 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01211 ECT2 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12437 ECT7 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021892_P001 ECT7, Zm00001e021892 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species
Zm00001e039003_P004 ECT2, Zm00001e039003 methylation reader (ECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 367 509
No external refs found!