Als_g12599

Description : not classified & original description: none

Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g12599

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00074520	evm_27.TU.AmTr_v1...	PsbP domain-containing protein 4, chloroplastic...	0.03	OrthoFinder output from all 47 species
Aev_g31777	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08421	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene57620.t1	Aspi01Gene57620	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene57621.t1	Aspi01Gene57621	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g14466	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01010018001	No alias	PsbP domain-containing protein 4, chloroplastic...	0.03	OrthoFinder output from all 47 species
LOC_Os12g08830.1	LOC_Os12g08830	PsbP domain-containing protein 4, chloroplastic...	0.04	OrthoFinder output from all 47 species
Msp_g02718	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g01184	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g07734	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03853	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
BP	GO:0006835	dicarboxylic acid transport	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015740	C4-dicarboxylate transport	IEP	HCCA
BP	GO:0015743	malate transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	154	297

External Links

No external refs found!