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  5. Als_g12472

Als_g12472 (PIN3, ATPIN3)


Aliases : PIN3, ATPIN3

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12472

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00241000 PIN5,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00250330 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AMTR_s00024p00250140 PIN3, ATPIN3,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00079560 PIN7, ATPIN7,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
AT1G23080 PIN7, ATPIN7 Auxin efflux carrier family protein 0.04 OrthoFinder output from all 47 species
AT5G16530 PIN5 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g015718 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050328 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08758 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06049 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G080600.1 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.15G035300.1 ATPIN1, PIN1,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01025748001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Gb_37787 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
LOC_Os01g45550.1 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
LOC_Os01g51780.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
LOC_Os01g58860.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12610.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Len_g17348 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06682 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
MA_61553g0020 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Msp_g13884 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g25443 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33653 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Smo234325 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Solyc02g087660.4.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc03g118740.3.1 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Solyc07g006900.2.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
Zm00001e018835_P004 PIN5, Zm00001e018835 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e020346_P002 ATPIN4, PIN4,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e024071_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 693
No external refs found!