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  5. Als_g12350

Als_g12350 (AtMYB17, MYB17)


Aliases : AtMYB17, MYB17

Description : MYB class-R2R3 subgroup-2 transcription factor & original description: none


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g12350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00057800 MYB58, ATMYB58,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s01267p00006490 ATMYB48-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.02 OrthoFinder output from all 47 species
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.03 OrthoFinder output from all 47 species
AT5G14750 MYB66, ATMYB66, WER, WER1 myb domain protein 66 0.03 OrthoFinder output from all 47 species
Aev_g02388 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ala_g02337 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ala_g18777 AtMYB20, MYB20 MYB class-R2R3 subgroup-13 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g22056 AtMYB83, MYB83 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23797 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04939.t1 Aspi01Gene04939 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21421.t1 AtMYB20, MYB20,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30134.t1 AtMYB17, MYB17,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35091.t1 AtMYB50, MYB50,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35097.t1 MYB103,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35098.t1 MYB103,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41541.t1 ATMYB46, MYB46,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43617.t1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61793.t1 AtMYB85, MYB85,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67198.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67200.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67206.t1 ATMIXTA, MYB16,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68160.t1 ATMYB46, MYB46,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71679.t1 MYB6, AtMYB6,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00875 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G075100.1 AtMYB20, MYB20,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g10687 AtMYB20, MYB20 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14426 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g21227 AtMYB17, MYB17 accessory protein (LMI2) of floral meristem identity... 0.05 OrthoFinder output from all 47 species
Ehy_g22700 AtMYB97, MYB97 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016768001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01025034001 ATMYB59-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_03227 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_40065 MYB55, AtMYB55 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g19330.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g42870.1 AtMYB17, MYB17,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g49986.1 AtMYB20, MYB20,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g20090.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49310.1 ATMYB21, MYB21,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os10g33810.1 ATMYB15, ATY19,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Len_g13946 AtMYB17, MYB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21247 MYB43, AtMYB43 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06374 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001222 ATMYB101, MYB101, ATM1 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sam_g08648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g089190.2.1 MYB121,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g074170.3.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc05g051550.2.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc07g054840.4.1 ATMYB102, ATM4,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc08g076700.1.1 MYB9, AtMYB9,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc08g076710.3.1 MYB9, AtMYB9,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc09g008250.4.1 MYB36, AtMYB36,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc09g090790.3.1 MYB305, ATMYB71,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc10g005460.3.1 ATMYB102, ATM4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g005640.2.1 ATMYB14, MYB14,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc12g099130.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Spa_g37892 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38047 MYB106, NOK, AtMYB106 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e003587_P001 DUO1, Zm00001e003587 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e004140_P002 ATMIXTA, MYB16,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e007904_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e015145_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e017470_P001 AtMYB112,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e020004_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e023024_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e032347_P001 MYB36, AtMYB36,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e041239_P001 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 61
IPR001005 SANT/Myb 67 112
No external refs found!