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  5. Als_g11502

Als_g11502 (RPL16A)


Aliases : RPL16A

Description : component *(uL5) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g11502

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00200160 RPL16A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00203150 RPL16A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT4G18730 RPL16B ribosomal protein L16B 0.03 OrthoFinder output from all 47 species
AT5G45775 No alias Ribosomal L5P family protein 0.03 OrthoFinder output from all 47 species
Adi_g004325 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g080915 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.38 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre01.g027000 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g38919 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_86694g0010 RPL16A component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp2g24740.1 RPL16A component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c5_3870V3.1 RPL16A, Pp3c5_3870 Ribosomal L5P family protein 0.02 OrthoFinder output from all 47 species
Sam_g17383 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Smo444767 RPL16A Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Solyc02g086240.3.1 RPL16A, Solyc02g086240 component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g07233 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g22809 No alias component *(uL5) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Spa_g54041 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g02344 RPL16A component *(uL5) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e024913_P001 RPL16A, Zm00001e024913 component RPL11 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e037255_P001 RPL16A, Zm00001e037255 component RPL11 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR031310 Ribosomal_L5_N 10 63
IPR031309 Ribosomal_L5_C 67 165
No external refs found!