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  5. Als_g11441

Als_g11441


Description : fimbrin actin-crosslinking factor & original description: none


Gene families : OG0001639 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001639_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g11441

Target Alias Description ECC score Gene Family Method Actions
AT5G48460 No alias Actin binding Calponin homology (CH) domain-containing protein 0.02 OrthoFinder output from all 47 species
Als_g62461 No alias fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15891 No alias fimbrin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g37580.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Mp1g27470.1 FIM5, FIM2 fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Msp_g10520 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04544 FIM5, FIM2 fimbrin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g049600.4.1 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e014968_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Zm00001e023425_P001 FIM5, FIM2,... fimbrin actin-crosslinking factor 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001715 CH_dom 268 368
IPR001715 CH_dom 391 494
IPR001715 CH_dom 145 237
IPR001715 CH_dom 512 614
No external refs found!