Description : component *(uS4) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0001396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001396_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Als_g11247 | |
Cluster | HCCA: Cluster_18 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G15200 | No alias | Ribosomal protein S4 | 0.05 | OrthoFinder output from all 47 species | |
Ceric.04G104600.1 | Ceric.04G104600 | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000826.24 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre08.g359750 | No alias | 40S ribosomal protein S9-1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01011384001 | No alias | 40S ribosomal protein S9-2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g05980.1 | LOC_Os03g05980 | component RPS9 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os11g38959.1 | LOC_Os11g38959 | component RPS9 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp6g10930.1 | No alias | component RPS9 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Pp3c12_9190V3.1 | Pp3c12_9190 | Ribosomal protein S4 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c13_19780V3.1 | Pp3c13_19780 | Ribosomal protein S4 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c3_23720V3.1 | Pp3c3_23720 | Ribosomal protein S4 | 0.01 | OrthoFinder output from all 47 species | |
Solyc04g005680.4.1 | Solyc04g005680 | component RPS9 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g007250.3.1 | Solyc05g007250 | component RPS9 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05706 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g09675 | No alias | component *(uS4) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010819_P002 | Zm00001e010819 | component RPS9 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e037961_P002 | Zm00001e037961 | component RPS9 of SSU proteome | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No external refs found! |