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  5. Als_g10965

Als_g10965


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10965
Cluster HCCA: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
AT5G47660 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g06719 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g59070 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02188 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07378.t2 AT-GT2, GT2,... Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27191.t1 Aspi01Gene27191 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54632.t1 Aspi01Gene54632 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0531.g075823 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g72625 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.36G000200.1 Ceric.36G000200 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08646 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24833 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11220 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65125 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018240 AT-GT2, GT2 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023745 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 445 532
IPR044822 Myb_DNA-bind_4 183 253
No external refs found!