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  5. Als_g10193

Als_g10193


Description : not classified & original description: none


Gene families : OG0000974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10193
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00060550 evm_27.TU.AmTr_v1... Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G19430 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Aev_g14663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02312 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015100 No alias not classified & original description: CDS=38-2224 0.05 OrthoFinder output from all 47 species
Azfi_s0081.g038650 No alias not classified & original description: CDS=64-1644 0.05 OrthoFinder output from all 47 species
Ceric.1Z024400.1 Ceric.1Z024400 not classified & original description: pacid=50628340... 0.03 OrthoFinder output from all 47 species
Dcu_g05763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009709001 No alias Probable methyltransferase PMT28 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01026451001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16057 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66110.1 LOC_Os01g66110 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56380.1 LOC_Os03g56380 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g09367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g04590.1 No alias Probable methyltransferase PMT24 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g44638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002237 No alias not classified & original description: CDS=481-2598 0.03 OrthoFinder output from all 47 species
Smo170677 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc04g080360.4.1 Solyc04g080360 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g052500.4.1 Solyc05g052500 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g056580.3.1 Solyc05g056580 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Tin_g02854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005847_P001 Zm00001e005847 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e027288_P002 Zm00001e027288 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 243 741
No external refs found!