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  5. Als_g10065

Als_g10065 (IBR3)


Aliases : IBR3

Description : monofunctionial hydroxyacyl-CoA dehydrogenase & original description: none


Gene families : OG0003472 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10065
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
AT3G06810 IBR3 acyl-CoA dehydrogenase-related 0.03 OrthoFinder output from all 47 species
LOC_Os07g47820.1 IBR3, LOC_Os07g47820 monofunctionial hydroxyacyl-CoA dehydrogenase 0.02 OrthoFinder output from all 47 species
MA_5991099g0010 IBR3 Probable acyl-CoA dehydrogenase IBR3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002575 Aminoglycoside_PTrfase 41 268
IPR013786 AcylCoA_DH/ox_N 404 540
IPR009075 AcylCo_DH/oxidase_C 658 806
IPR006091 Acyl-CoA_Oxase/DH_mid-dom 545 646
No external refs found!