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  5. Als_g10014

Als_g10014 (LIL3:1)


Aliases : LIL3:1

Description : LHCII-stabilizing factor *(SEP3) & original description: none


Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g10014

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0002.g001642 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description:... 0.03 OrthoFinder output from all 47 species
Cre03.g199535 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
LOC_Os02g03330.1 LIL3:1, LOC_Os02g03330 SEP3 LHC-related protein 0.02 OrthoFinder output from all 47 species
Mp1g17030.1 LIL3:1 SEP3 LHC-related protein 0.06 OrthoFinder output from all 47 species
Sam_g15171 No alias LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Smo106498 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Solyc08g007180.3.1 LIL3:1, Solyc08g007180 SEP3 LHC-related protein 0.04 OrthoFinder output from all 47 species
Solyc08g077880.3.1 LIL3:1, Solyc08g077880 SEP3 LHC-related protein 0.05 OrthoFinder output from all 47 species
Zm00001e013528_P001 LIL3:1, Zm00001e013528 SEP3 LHC-related protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!