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  5. Als_g09894

Als_g09894


Description : not classified & original description: none


Gene families : OG0004660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09894

Target Alias Description ECC score Gene Family Method Actions
Adi_g053627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.37G033500.1 Ceric.37G033500 not classified & original description: pacid=50616272... 0.04 OrthoFinder output from all 47 species
Dcu_g12020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1537g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g17670.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g43205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo113277 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc12g099890.2.1 Solyc12g099890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0000776 kinetochore IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0034508 centromere complex assembly IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR012977 SDA1_N 77 128
IPR007949 SDA1_C 435 810
No external refs found!