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Aliases : PTAC10, PDE312
Description : cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10) & original description: none
Gene families : OG0006411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006411_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pnu_g11249 | |
| Cluster | HCCA: Cluster_81 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0353.g066638 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24673 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g05620 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g111050.3.1 | PTAC10, PDE312,... | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |