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  5. Als_g09346

Als_g09346 (VPS60.1)


Aliases : VPS60.1

Description : associated protein of ESCRT-III complex *(VPS60) & original description: none


Gene families : OG0002554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g09346
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Aev_g09924 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Ala_g15171 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Ceric.19G030500.1 VPS60.1, Ceric.19G030500 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g01350.1 VPS60.1, LOC_Os01g01350 VPS60 associated protein of ESCRT-III complex 0.02 OrthoFinder output from all 47 species
Len_g01040 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.09 OrthoFinder output from all 47 species
Ore_g15872 VPS60.1 associated protein of ESCRT-III complex *(VPS60) &... 0.03 OrthoFinder output from all 47 species
Sam_g15856 No alias associated protein of ESCRT-III complex *(VPS60) &... 0.02 OrthoFinder output from all 47 species
Solyc05g055170.3.1 VPS60.1, Solyc05g055170 VPS60 associated protein of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Zm00001e017177_P001 VPS60.1, Zm00001e017177 VPS60 associated protein of ESCRT-III complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 209
No external refs found!