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  5. Pnu_g11210

Pnu_g11210


Description : not classified & original description: none


Gene families : OG0007858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11210
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT5G20220 No alias zinc knuckle (CCHC-type) family protein 0.03 OrthoFinder output from all 47 species
Aev_g19821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69444 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene70463.t1 Aspi01Gene70463 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G003700.1 Ceric.06G003700 not classified & original description: pacid=50620472... 0.05 OrthoFinder output from all 47 species
Dac_g31054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020063001 No alias No description available 0.05 OrthoFinder output from all 47 species
Ore_g09649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028179_P004 Zm00001e028179 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!