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  5. Als_g08944

Als_g08944 (RACK1C_AT)


Aliases : RACK1C_AT

Description : component *(RACK1) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08944
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene18484.t2 RACK1C_AT,... component *(RACK1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000254.89 TOZ Dynein assembly factor with WDR repeat domains 1... 0.01 OrthoFinder output from all 47 species
Cre06.g278222 RACK1C_AT Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os01g49290.1 RACK1C_AT, LOC_Os01g49290 associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp3g15630.1 RACK1C_AT associated component RACK1 of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g08733 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g04455 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g19034 No alias component *(RACK1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc06g069010.3.1 RACK1B_AT, Solyc06g069010 associated component RACK1 of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g25399 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g04974 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g45000 RACK1C_AT component *(RACK1) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 56 90
IPR001680 WD40_repeat 96 132
IPR001680 WD40_repeat 234 260
IPR001680 WD40_repeat 283 311
IPR001680 WD40_repeat 145 178
IPR001680 WD40_repeat 186 220
IPR001680 WD40_repeat 9 44
No external refs found!