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  5. Als_g08909

Als_g08909 (SC35, ATSC35, At-SC35)


Aliases : SC35, ATSC35, At-SC35

Description : not classified & original description: none


Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08909
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Adi_g060585 SC35, ATSC35, At-SC35 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12134 SC35, ATSC35, At-SC35 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G043800.1 SC35, ATSC35,... not classified & original description: pacid=50599740... 0.03 OrthoFinder output from all 47 species
Dcu_g14869 SC35, ATSC35, At-SC35 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42681 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013496 SC35, ATSC35, At-SC35 not classified & original description: CDS=98-997 0.03 OrthoFinder output from all 47 species
Solyc04g074040.3.1 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e024321_P003 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 87
No external refs found!