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  5. Als_g08814

Als_g08814 (CAMTA3, SR1)


Aliases : CAMTA3, SR1

Description : CAMTA-type transcription factor & original description: none


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08814

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 CAMTA3, SR1,... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00042800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 OrthoFinder output from all 47 species
AT4G16150 No alias calmodulin binding;transcription regulators 0.05 OrthoFinder output from all 47 species
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.03 OrthoFinder output from all 47 species
Als_g16617 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02392 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07073 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08505 No alias CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G055700.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G013800.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G019600.1 Ceric.31G019600 CAMTA-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09534 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05100 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035027001 No alias RNA biosynthesis.transcriptional activation.CAMTA... 0.03 OrthoFinder output from all 47 species
Lfl_g06256 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_16615g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp7g03150.1 CAMTA3, SR1 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Nbi_g04436 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07183 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g056270.4.1 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Solyc05g015650.3.1 Solyc05g015650 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Spa_g30645 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002794_P002 CAMTA3, SR1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Zm00001e008367_P002 Zm00001e008367 transcription factor (CAMTA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 658 709
IPR002909 IPT_dom 449 533
IPR005559 CG-1_dom 28 143
IPR000048 IQ_motif_EF-hand-BS 966 985
IPR000048 IQ_motif_EF-hand-BS 868 886
IPR000048 IQ_motif_EF-hand-BS 891 909
No external refs found!