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  5. Als_g08664

Als_g08664


Description : component *(MED26) of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08664
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Aob_g07318 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025894 No alias not classified & original description: CDS=217-1497 0.03 OrthoFinder output from all 47 species
Cba_g24552 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Dcu_g02986 No alias component *(MED26) of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06850.1 LOC_Os12g06850 Probable mediator of RNA polymerase II transcription... 0.02 OrthoFinder output from all 47 species
Mp1g25310.1 No alias component MED26 of MEDIATOR transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Smo444137 No alias No description available 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 154 202
No external refs found!