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  5. Als_g08517

Als_g08517


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08517

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265700 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00221750 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Adi_g011502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g019265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05309 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Aob_g17355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68976.t1 Aspi01Gene68976 regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015632 No alias not classified & original description: CDS=147-1991 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.03 OrthoFinder output from all 47 species
Cba_g03276 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07339 HEN4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12024 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g17642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71670 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G052900.1 Ceric.02G052900 not classified & original description: pacid=50583938... 0.04 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.08 OrthoFinder output from all 47 species
Ceric.14G023600.1 Ceric.14G023600 not classified & original description: pacid=50632924... 0.03 OrthoFinder output from all 47 species
Ceric.25G027100.1 Ceric.25G027100 not classified & original description: pacid=50594480... 0.05 OrthoFinder output from all 47 species
Ceric.26G008900.1 Ceric.26G008900 not classified & original description: pacid=50599495... 0.03 OrthoFinder output from all 47 species
Ceric.32G028300.1 Ceric.32G028300 not classified & original description: pacid=50598029... 0.06 OrthoFinder output from all 47 species
Dac_g16018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009261001 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.05 OrthoFinder output from all 47 species
LOC_Os06g23460.1 LOC_Os06g23460 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g36497 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g05526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433640g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_108374g0010 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.04 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05364 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g11925 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g04462 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g09995 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g15528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020404 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc04g077060.3.1 Solyc04g077060 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc08g048500.3.1 Solyc08g048500 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g055780.3.1 Solyc12g055780 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g05211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17412 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Spa_g22547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07199 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g09067 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001825_P001 Zm00001e001825 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e004486_P005 Zm00001e004486 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 634 696
IPR004088 KH_dom_type_1 347 398
IPR004088 KH_dom_type_1 429 492
IPR004088 KH_dom_type_1 44 95
IPR004088 KH_dom_type_1 179 246
No external refs found!