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  5. Als_g08121

Als_g08121


Description : component *(S2Lb/SWD2) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0002761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g08121
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AT5G66240 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001123 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Adi_g015900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08120 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.04 OrthoFinder output from all 47 species
Aob_g22882 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03853.t1 Aspi01Gene03853 component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Ceric.16G020200.1 Ceric.16G020200 component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Dac_g01475 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40030.1 LOC_Os07g40030 auxiliary component S2Lb of COMPASS histone... 0.02 OrthoFinder output from all 47 species
Ppi_g07411 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 113 148
IPR001680 WD40_repeat 248 279
IPR001680 WD40_repeat 32 61
No external refs found!