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  5. Pnu_g11106

Pnu_g11106


Description : not classified & original description: none


Gene families : OG0003076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11106
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00119660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g018663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g37105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38806.t1 Aspi01Gene38806 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_39382 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g66170.1 LOC_Os01g66170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g01439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019037_P002 Zm00001e019037 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032816 SNARE_assoc 272 390
No external refs found!