1. Home
  2. Species
  3. Alsophila latebrosa
  4. Sequence
  5. Als_g07773

Als_g07773


Description : not classified & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07773

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.02 OrthoFinder output from all 47 species
Adi_g018593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074564 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Aob_g04427 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Cba_g33461 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.38G012000.1 Ceric.38G012000 not classified & original description: pacid=50579791... 0.05 OrthoFinder output from all 47 species
Cre11.g476200 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g33545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10013 ZFWD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_15421 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_32150 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Lfl_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433099g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_17477g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g072720.3.1 Solyc06g072720 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 161 185
IPR000571 Znf_CCCH 223 247
No external refs found!