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  5. Als_g07479

Als_g07479


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07479

Target Alias Description ECC score Gene Family Method Actions
Ala_g20462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23943 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g26435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.01 OrthoFinder output from all 47 species
Azfi_s0229.g059123 No alias not classified & original description: CDS=1-2415 0.05 OrthoFinder output from all 47 species
Azfi_s0242.g059819 No alias not classified & original description: CDS=1-2853 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.01 OrthoFinder output from all 47 species
Azfi_s0254.g060453 No alias not classified & original description: CDS=1-2166 0.03 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.01 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.01 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.01 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07596 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G019200.1 Ceric.11G019200 not classified & original description: pacid=50596467... 0.03 OrthoFinder output from all 47 species
Ceric.20G054700.1 Ceric.20G054700 not classified & original description: pacid=50567573... 0.02 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.01 OrthoFinder output from all 47 species
Dac_g40274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24117 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19629 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13702 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g08788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g23334 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g39215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g13474 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21941 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44241 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 180 226
IPR002885 Pentatricopeptide_repeat 631 677
IPR002885 Pentatricopeptide_repeat 397 444
IPR002885 Pentatricopeptide_repeat 282 329
IPR002885 Pentatricopeptide_repeat 517 563
IPR002885 Pentatricopeptide_repeat 489 514
IPR002885 Pentatricopeptide_repeat 90 110
IPR002885 Pentatricopeptide_repeat 254 274
IPR002885 Pentatricopeptide_repeat 757 816
IPR046848 E_motif 850 892
No external refs found!