Pnu_g11052


Description : night-time repressor *(COR27) & original description: none


Gene families : OG0001328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001328_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g11052

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00207p00019810 COR27,... No description available 0.02 OrthoFinder output from all 47 species
AT5G42900 COR27 cold regulated gene 27 0.03 OrthoFinder output from all 47 species
Adi_g004658 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076879 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07190 COR27 night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06680 COR27 night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09170 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29464 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g08580.1 COR27, LOC_Os03g08580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g57357 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00651 No alias night-time repressor *(COR27) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17018 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17490 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g078880.3.1 COR27, Solyc04g078880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g29182 No alias night-time repressor *(COR27) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000619_P002 COR27, Zm00001e000619 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!