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  5. Als_g07397

Als_g07397 (ATLUP2, LUP2)


Aliases : ATLUP2, LUP2

Description : EC_5.4 intramolecular transferase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07397
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19102 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.03 OrthoFinder output from all 47 species
Mp8g14150.1 LAS1 Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.05 OrthoFinder output from all 47 species
Ppi_g34152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 333 668
IPR032697 SQ_cyclase_N 34 325
No external refs found!