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  5. Als_g07232

Als_g07232


Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g07232

Target Alias Description ECC score Gene Family Method Actions
AT5G66055 EMB16, EMB2036, AKRP ankyrin repeat protein 0.02 OrthoFinder output from all 47 species
Adi_g045216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06535.t1 Aspi01Gene06535 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0371.g067116 EMB16, EMB2036, AKRP not classified & original description: CDS=69-1934 0.04 OrthoFinder output from all 47 species
Dac_g36507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005198001 EMB16, EMB2036, AKRP Ankyrin repeat domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp4g14600.1 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g26075 EMB139, EMB506 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00869 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33242 EMB16, EMB2036, AKRP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32282 EMB139, EMB506 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e000291_P001 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 280 359
IPR002110 Ankyrin_rpt 233 279
No external refs found!