Als_g06727


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06727

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00023600 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g50270... 0.04 OrthoFinder output from all 47 species
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.05 OrthoFinder output from all 47 species
Adi_g044762 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04389 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g05483 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01610.t1 CRR22, Aspi01Gene01610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52145.t1 CRR22, Aspi01Gene52145 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.08 OrthoFinder output from all 47 species
Cba_g26542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g23816 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35962 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.05 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07796 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25822 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15612 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14266 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11781 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63629 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05896 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo101093 EMB2261 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Smo132317 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
Smo82024 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Solyc11g017370.3.1 Solyc11g017370 RNA editing factor (AEF1) 0.02 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g31286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032679_P001 Zm00001e032679 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 54 102
IPR002885 Pentatricopeptide_repeat 26 53
IPR002885 Pentatricopeptide_repeat 131 153
No external refs found!