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  5. Als_g06587

Als_g06587


Description : component *(RPP3) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0003859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003859_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g06587
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00182570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT5G57290 No alias 60S acidic ribosomal protein family 0.03 OrthoFinder output from all 47 species
Adi_g053256 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g124944 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ala_g10658 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g41418 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0393.g067832 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13080.1 LOC_Os01g13080 component RPP3 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os06g48780.1 LOC_Os06g48780 component RPP3 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Lfl_g28349 No alias component *(RPP3) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c21_16160V3.1 Pp3c21_16160 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Zm00001e013180_P001 Zm00001e013180 component RPP3 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!