1. Home
  2. Species
  3. Psilotum nudum
  4. Sequence
  5. Pnu_g10935

Pnu_g10935


Description : not classified & original description: none


Gene families : OG0008242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008242_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g10935

Target Alias Description ECC score Gene Family Method Actions
Adi_g013940 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31211 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17383 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g08971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.30G016000.1 Ceric.30G016000 not classified & original description: pacid=50609518... 0.04 OrthoFinder output from all 47 species
Dac_g05483 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g14487 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08094 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g17977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02713 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005865 No alias not classified & original description: CDS=145-783 0.03 OrthoFinder output from all 47 species
Sam_g28936 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g18143 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 90 192
No external refs found!